Change to WAMR_CONFIGURABLE_BOUNDS_CHECKS, and fix CodeQL compilation errors which were introduced by PR #3406. ps. https://github.com/bytecodealliance/wasm-micro-runtime/pull/3393#discussion_r1591810998 https://github.com/bytecodealliance/wasm-micro-runtime/actions/runs/9055318553/job/24876266629
- Move CodeQL scripts to the scripts directory - Only report error in CI if it's a CodeQL reported issue and was not dismissed before and is likely to be an actual error
