Refactor APIs and data structures as preliminary work for Memory64 (#3209)

# Change the data type representing linear memory address from u32 to u64

## APIs signature changes
- (Export)wasm_runtime_module_malloc
  - wasm_module_malloc
    - wasm_module_malloc_internal
  - aot_module_malloc
    - aot_module_malloc_internal
- wasm_runtime_module_realloc
  - wasm_module_realloc
    - wasm_module_realloc_internal
  - aot_module_realloc
    - aot_module_realloc_internal
- (Export)wasm_runtime_module_free
  - wasm_module_free
    - wasm_module_free_internal
  - aot_module_malloc
    - aot_module_free_internal
- (Export)wasm_runtime_module_dup_data
  - wasm_module_dup_data
  - aot_module_dup_data
- (Export)wasm_runtime_validate_app_addr
- (Export)wasm_runtime_validate_app_str_addr
- (Export)wasm_runtime_validate_native_addr
- (Export)wasm_runtime_addr_app_to_native
- (Export)wasm_runtime_addr_native_to_app
- (Export)wasm_runtime_get_app_addr_range
- aot_set_aux_stack
- aot_get_aux_stack
- wasm_set_aux_stack
- wasm_get_aux_stack
- aot_check_app_addr_and_convert, wasm_check_app_addr_and_convert
  and jit_check_app_addr_and_convert
- wasm_exec_env_set_aux_stack
- wasm_exec_env_get_aux_stack
- wasm_cluster_create_thread
- wasm_cluster_allocate_aux_stack
- wasm_cluster_free_aux_stack

## Data structure changes
- WASMModule and AOTModule
  - field aux_data_end, aux_heap_base and aux_stack_bottom
- WASMExecEnv
  - field aux_stack_boundary and aux_stack_bottom
- AOTCompData
  - field aux_data_end, aux_heap_base and aux_stack_bottom
- WASMMemoryInstance(AOTMemoryInstance)
  - field memory_data_size and change __padding to is_memory64
- WASMModuleInstMemConsumption
  - field total_size and memories_size
- WASMDebugExecutionMemory
  - field start_offset and current_pos
- WASMCluster
  - field stack_tops

## Components that are affected by the APIs and data structure changes
- libc-builtin
- libc-emcc
- libc-uvwasi
- libc-wasi
- Python and Go Language Embedding
- Interpreter Debug engine
- Multi-thread: lib-pthread, wasi-threads and thread manager

language-bindings/python/src/wamr/wamrapi/wamr.py

@@ -6,6 +6,7 @@ from ctypes import addressof
 from ctypes import c_char
 from ctypes import c_uint
 from ctypes import c_uint8
+from ctypes import c_uint64
 from ctypes import c_void_p
 from ctypes import cast
 from ctypes import create_string_buffer
@@ -167,7 +168,7 @@ class Instance:
             raise Exception("Error while creating module instance")
         return module_inst
 
-    def malloc(self, nbytes: int, native_handler) -> c_uint:
+    def malloc(self, nbytes: int, native_handler) -> c_uint64:
         return wasm_runtime_module_malloc(self.module_inst, nbytes, native_handler)
 
     def free(self, wasm_handler) -> None: